BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023G02LP1|AL428101
(974 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1805 1900 0.0
3x_Contig180 508 e-144
>3x_Contig1805
Length = 19369
Score = 1900 bits (958), Expect = 0.0
Identities = 969/972 (99%), Gaps = 1/972 (0%)
Strand = Plus / Plus
Query: 1 atctacgc-gaaaaatgcagctctgcccattcaaatgcccgtacttaggagcagtgataa 59
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4250 atctacgcagaaaaatgcagctctgcccattcaaatgcccgtacttaggagcagtgataa 4309
Query: 60 caaaataaagaaaaattccggcttcggatagaacccaagtgtcggatttggaatttcttt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4310 caaaataaagaaaaattccggcttcggatagaacccaagtgtcggatttggaatttcttt 4369
Query: 120 attccaaagctttgttctttagcttagaatggccttttatgcagctcttttaaaaaaaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4370 attccaaagctttgttctttagcttagaatggccttttatgcagctcttttaaaaaaaaa 4429
Query: 180 gatgggtttagcaggtcagtctaagggaacaaagcttttatctgtgtctgagctgaaagg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4430 gatgggtttagcaggtcagtctaagggaacaaagcttttatctgtgtctgagctgaaagg 4489
Query: 240 ctcttgtttgccattgaacacaggttctggaggattactgcatgcttgacaataaccaac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4490 ctcttgtttgccattgaacacaggttctggaggattactgcatgcttgacaataaccaac 4549
Query: 300 tccaccagtctccaaaaactcaaaaagttgatttacatacttctcgcaattgatgctgag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4550 tccaccagtctccaaaaactcaaaaagttgatttacatacttctcgcaattgatgctgag 4609
Query: 360 tatgttacttcgactattgagtgcaaagacaatcggcatagaacatttttcttttgtgtt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4610 tatgttacttcgactattgagtgcaaagacaatcggcatagaacatttttcttttgtgtt 4669
Query: 420 tttggattcaagttattaaacagactattgcgttagtgtcctcccacagttcattagtca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4670 tttggattcaagttattaaacagactattgcgttagtgtcctcccacagttcattagtca 4729
Query: 480 ctggtttcaaattattgttggtgttgttttatttttaggcggacattctccttcccttca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4730 ctggtttcaaattattgttggtgttgttttatttttaggcggacattctccttcccttca 4789
Query: 540 atgtactttaccaacgtatacctgaaattacaagttggggtgcacagaaagcagtgttcc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4790 atgtactttaccaacgtatacctgaaattacaagttggggtgcacagaaagcagtgttcc 4849
Query: 600 tgattatatgcacttatcggccatatgctgctactgaaatgttatttctactgaaaattt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4850 tgattatatgcacttatcggccatatgctgctactgaaatgttatttctactgaaaattt 4909
Query: 660 caatttggtatgtatatatacaagctgatagaaaccattaggaggtactaaggaaaactc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4910 caatttggtatgtatatatacaagctgatagaaaccattaggaggtactaaggaaaactc 4969
Query: 720 aatgacatttaaagtgtgaccgccattaattgtttgtttatagaaaacaaactaatagca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4970 aatgacatttaaagtgtgaccgccattaattgtttgtttatagaaaacaaactaatagca 5029
Query: 780 tcaaaaaacaaaaggtcaacattcaaaacatcatgcgcaattccaggtacagcctgttgg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5030 tcaaaaaacaaaaggtcaacattcaaaacatcatgcgcaattccaggtacagcctgttgg 5089
Query: 840 tgttgttagcagcgttatcaaacaatattcaagcacaaagcactactgatgaagtcatta 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5090 tgttgttagcagcgttatcaaacaatattcaagcacaaagcactactgatgaagtcatta 5149
Query: 900 taggatgtgctcctgcagagaattctttwaagaaaggttttgaagttagttactatcact 959
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 5150 taggatgtgctcctgcagagaattctttaaagaaaggttttgaagttagttactatcact 5209
Query: 960 atcccaaaactg 971
|||| |||||||
Sbjct: 5210 atccaaaaactg 5221
>3x_Contig180
Length = 1260
Score = 508 bits (256), Expect = e-144
Identities = 288/296 (97%), Gaps = 2/296 (0%)
Strand = Plus / Minus
Query: 634 tgaaatgt-tatttctactgaaaat-ttcaatttggtatgtatatatacaagctgataga 691
|||||||| ||||| || ||||||| || |||||||||| ||||||||||||||||||||
Sbjct: 299 tgaaatgtgtatttataatgaaaatgttaaatttggtatatatatatacaagctgataga 240
Query: 692 aaccattaggaggtactaaggaaaactcaatgacatttaaagtgtgaccgccattaattg 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 aaccattaggaggtactaaggaaaactcaatgacatttaaagtgtgaccgccattaattg 180
Query: 752 tttgtttatagaaaacaaactaatagcatcaaaaaacaaaaggtcaacattcaaaacatc 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 tttgtttatagaaaacaaactaatagcatcaaaaaacaaaaggtcaacattcaaaacatc 120
Query: 812 atgcgcaattccaggtacagcctgttggtgttgttagcagcgttatcaaacaatattcaa 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 atgcgcaattccaggtacagcctgttggtgttgttagcagcgttatcaaacaatattcaa 60
Query: 872 gcacaaagcactactgatgaagtcattataggatgtgctcctgcagagaattcttt 927
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 59 gcacaaagcactactgatgaagtcattataggatgtgctcctgcttagaattcttt 4
Score = 280 bits (141), Expect = 4e-75
Identities = 459/565 (81%)
Strand = Plus / Minus
Query: 44 ttaggagcagtgataacaaaataaagaaaaattccggcttcggatagaacccaagtgtcg 103
||||||| |||||||| |||||||||||||||| || || |||||||| |||||| |
Sbjct: 892 ttaggagaagtgataaaaaaataaagaaaaattaaggattaggatagaaaaaaagtgtag 833
Query: 104 gatttggaatttctttattccaaagctttgttctttagcttagaatggccttttatgcag 163
|||||||||||| |||||| |||| |||||| ||||| ||||||||| | ||||| ||
Sbjct: 832 gatttggaatttatttattaaaaagatttgttatttagattagaatggaatattatgaag 773
Query: 164 ctcttttaaaaaaaaagatgggtttagcaggtcagtctaagggaacaaagcttttatctg 223
| | |||||||||||||||||||||| |||| ||| |||||||| |||| | |||| ||
Sbjct: 772 atatattaaaaaaaaagatgggtttagaaggtaagtataagggaaaaaagatattatatg 713
Query: 224 tgtctgagctgaaaggctcttgtttgccattgaacacaggttctggaggattactgcatg 283
||| |||| ||||||| | ||||||| |||||| | ||||| |||||||||| || |||
Sbjct: 712 tgtatgagatgaaaggatattgtttgaaattgaaaaaaggttatggaggattaatgaatg 653
Query: 284 cttgacaataaccaactccaccagtctccaaaaactcaaaaagttgatttacatacttct 343
|||| ||||| || | | ||| | ||||| | |||||||||||||| ||| || |
Sbjct: 652 attgaaaataaaaaaataaaaaagtataaaaaaaataaaaaagttgatttaaataattat 593
Query: 344 cgcaattgatgctgagtatgttacttcgactattgagtgcaaagacaatcggcatagaac 403
| |||||||| ||||||||||| || || ||||||||| ||||| ||| || ||||||
Sbjct: 592 agaaattgatgatgagtatgttaattagaatattgagtgaaaagaaaataggaatagaaa 533
Query: 404 atttttcttttgtgtttttggattcaagttattaaacagactattgcgttagtgtcctcc 463
|||||| ||||||||||||||||| ||||||||||| ||| ||||| |||||||| |
Sbjct: 532 atttttattttgtgtttttggattaaagttattaaaaagaatattgagttagtgtaataa 473
Query: 464 cacagttcattagtcactggtttcaaattattgttggtgttgttttatttttaggcggac 523
| |||| |||||| | |||||| ||||||||||||||||||||||||| ||||| |||
Sbjct: 472 aaaagttaattagtaaatggtttaaaattattgttggtgttgttttattattaggaggaa 413
Query: 524 attctccttcccttcaatgtactttaccaacgtatacctgaaattacaagttggggtgca 583
||| | || || |||||| |||| || ||||| |||||||| ||||||||||| |
Sbjct: 412 attataattaaattaaatgtaatttaaaaaagtataaatgaaattaaaagttggggtgaa 353
Query: 584 cagaaagcagtgttcctgattatat 608
|||||| |||||| |||||||||
Sbjct: 352 aagaaagaagtgttaatgattatat 328
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9567
Number of Sequences: 1807
Number of extensions: 9567
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 2
length of query: 974
length of database: 10,358,551
effective HSP length: 16
effective length of query: 958
effective length of database: 10,329,639
effective search space: 9895794162
effective search space used: 9895794162
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)